pr-2016-01052k_0004PTMOracle is a Cytoscape app that allows users to co-visualize and co-analyze post-translational modifications (PTMs) in the context of protein-protein interaction (PPI) networks. Download PTMOracle via the Cytoscape app store or via Bitbucket repository.

By using PTMOracle, users will be able to:

  • Co-visualize and co-analyse PTMs in the context of PPI Networks.
  • Explore the role of domains, motifs and disordered regions in PPIs.
  • Identify proteins of interest and explore network visualisations that address complex PTM-associated relationships.

For more information, please refer to the article:
Aidan P Tay, Chi Nam Ignatius Pang, Daniel L Winter, and Marc R. Wilkins.
PTMOracle: a Cytoscape app for co-visualising and co-analysing post-translational modifications in protein interaction networks. J. Proteome Res. 2017 16 (5) 1988-2003. [abstract]

Alternatively, visit our wiki page.